Sort runs in a qlist based on an attribute

sortQ(qlist, by = "k", decreasing = FALSE, debug = FALSE)

Arguments

qlist	A qlist object
by	A valid attribute name. Generally 'k' or 'ind'. Structure runs can take loci, burin, reps etc. Can take more than one name to arrange by multiple fields. For example `by=c("ind","k")`. See details.
decreasing	A logical indicating the direction of sorting.
debug	Logical for internal use

Value

A sorted qlist object

Details

Argument 'by' can be any attribute name returned by sapply(qlist,attributes) except 'names', 'class' and 'row.names'. This is usually similar to tabulateQ(qlist,sorttable=FALSE).

Examples


sfiles <- list.files(path=system.file("files/structure",package="pophelper"), full.names=TRUE)
slist <- readQ(sfiles)
slist_1 <- sortQ(slist)
names(slist)
#>  [1] "structure_01" "structure_02" "structure_03" "structure_04" "structure_05"
#>  [6] "structure_06" "structure_07" "structure_08" "structure_09" "structure_10"
#> [11] "structure_11" "structure_12" "structure_13" "structure_14" "structure_15"
#> [16] "structure_16" "structure_17"
names(slist_1)
#>  [1] "structure_01" "structure_02" "structure_09" "structure_03" "structure_04"
#>  [6] "structure_10" "structure_05" "structure_11" "structure_15" "structure_06"
#> [11] "structure_12" "structure_16" "structure_07" "structure_13" "structure_17"
#> [16] "structure_08" "structure_14"